Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus.
Genome size (bp): 2160267
Number of genes 2124
Oriloc predictions: Origin 0 kb Terminus 987 kb
Worning et al., 2006: Origin 2143 kb Terminus 989 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1327.93 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.78 kb, 236.27 kb
Consensus predictions: Origin 0 kb Terminus 987 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 111 | 0 | 127 |
| 772 | 0 | 982 | |
| GC-skew reverse | 1233 | 0 | 1028 |
| AT-skew forward | 433 | 0.00667 | 553 |
| 510 | 0.00667 | 621 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 111 (127.465 kb) | leading | -0.013 |
| 112 (131.5245 kb) | 772 (981.8665 kb) | leading | 0.152 | |
| 773 (983.8775 kb) | 1017 (2160.167 kb) | lagging | -0.195 | |
| GC-skew reverse | 1018 (0 kb) | 1233 (1028.019 kb) | NA | 0.158 |
| 1234 (1029.4775 kb) | 2124 (2160.167 kb) | lagging | -0.134 | |
| AT-skew forward | 1 (0 kb) | 433 (552.905 kb) | leading | -0.094 |
| 434 (554.798 kb) | 510 (621.314 kb) | leading | 0.023 | |
| 511 (621.851 kb) | 1017 (2160.167 kb) | NA | -0.109 |