Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.
Genome size (bp): 5411809
Number of genes 5234
Oriloc predictions: Origin 0 kb Terminus 2676 kb
Worning et al., 2006: Origin 1 kb Terminus 2681 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 5383.817 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.95 kb, 4525.58 kb
Consensus predictions: Origin 0 kb Terminus 2676 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 124 | NA | 141 |
| 1927 | NA | 2677 | |
| GC-skew reverse | 3213 | NA | 2631 |
| AT-skew forward | 1837 | NA | 2547 |
| AT-skew reverse | 3252 | NA | 2720 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 124 (140.7915 kb) | leading | 0.2 |
| 125 (141.2235 kb) | 1927 (2677.208 kb) | leading | 0.355 | |
| 1928 (2678.8765 kb) | 2610 (5411.527 kb) | lagging | -0.133 | |
| GC-skew reverse | 2611 (0 kb) | 3213 (2631.3125 kb) | leading | 0.125 |
| 3214 (2632.799 kb) | 5234 (5411.527 kb) | lagging | -0.31 | |
| AT-skew forward | 1 (0 kb) | 1837 (2546.794 kb) | leading | 0.034 |
| 1838 (2547.121 kb) | 2610 (5411.527 kb) | lagging | 0.002 | |
| AT-skew reverse | 2611 (0 kb) | 3252 (2719.717 kb) | leading | 0.008 |
| 3253 (2722.8415 kb) | 5234 (5411.527 kb) | lagging | -0.032 |
More G than C on the leading strand for replication.