Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.
Genome size (bp): 5224283
Number of genes 5600
Oriloc predictions: Origin 0 kb Terminus 2575 kb
Worning et al., 2006: Origin 2 kb Terminus 2590 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 5196.309 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1.08 kb
Consensus predictions: Origin 0 kb Terminus 2575 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 345 | NA | 432 |
| 1995 | NA | 2602 | |
| GC-skew reverse | 3478 | NA | 2582 |
| AT-skew forward | 2041 | NA | 2755 |
| AT-skew reverse | 3495 | NA | 2604 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 345 (431.9995 kb) | leading | 0.212 |
| 346 (432.4325 kb) | 1995 (2602.2435 kb) | leading | 0.353 | |
| 1996 (2605.729 kb) | 2771 (5224.125 kb) | lagging | -0.12 | |
| GC-skew reverse | 2772 (0 kb) | 3478 (2581.7965 kb) | leading | 0.117 |
| 3479 (2589.113 kb) | 5600 (5224.125 kb) | lagging | -0.316 | |
| AT-skew forward | 1 (0 kb) | 2041 (2755.447 kb) | leading | 0.034 |
| 2042 (2756.0725 kb) | 2771 (5224.125 kb) | lagging | 0.004 | |
| AT-skew reverse | 2772 (0 kb) | 3495 (2603.886 kb) | leading | 0.02 |
| 3496 (2605.107 kb) | 5600 (5224.125 kb) | lagging | -0.034 |
More G than C on the leading strand for replication.