Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.
Genome size (bp): 1931047
Number of genes 1488
Oriloc predictions: Origin 0 kb Terminus 957 kb
Worning et al., 2006: Origin 1931 kb Terminus 974 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1930.908 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 159.56 kb
Consensus predictions: Origin 0 kb Terminus 957 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 463 | 0 | 983 |
| GC-skew reverse | 1074 | 0 | 944 |
| 1321 | 0.02444 | 1464 | |
| 1405 | 0.03111 | 1742 | |
| AT-skew forward | 483 | 0.00667 | 1066 |
| AT-skew reverse | 1062 | 0 | 924 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 463 (982.769 kb) | leading | 0.303 |
| 464 (999.642 kb) | 749 (1930.402 kb) | lagging | -0.183 | |
| GC-skew reverse | 750 (0 kb) | 1074 (944.3505 kb) | leading | 0.127 |
| 1075 (947.1655 kb) | 1321 (1464.478 kb) | lagging | -0.369 | |
| 1322 (1469.286 kb) | 1405 (1742.241 kb) | lagging | -0.147 | |
| 1406 (1743.5405 kb) | 1488 (1930.402 kb) | lagging | -0.361 | |
| AT-skew forward | 1 (0 kb) | 483 (1066.477 kb) | leading | -0.194 |
| 484 (1068.857 kb) | 749 (1930.402 kb) | lagging | -0.061 | |
| AT-skew reverse | 750 (0 kb) | 1062 (923.6905 kb) | leading | 0.089 |
| 1063 (924.942 kb) | 1488 (1930.402 kb) | lagging | 0.238 |
More G than C on the leading strand for replication.