Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.
Genome size (bp): 5300915
Number of genes 5134
Oriloc predictions: Origin 0 kb Terminus 2557 kb
Worning et al., 2006: Origin 0 kb Terminus 2572 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 5273.051 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1.08 kb
Consensus predictions: Origin 0 kb Terminus 2557 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 817 | NA | 1265 |
| 1771 | NA | 2563 | |
| GC-skew reverse | 3088 | NA | 2555 |
| AT-skew forward | 1633 | NA | 2373 |
| AT-skew reverse | 3185 | NA | 2681 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 817 (1264.878 kb) | leading | 0.314 |
| 818 (1265.355 kb) | 1771 (2562.592 kb) | leading | 0.372 | |
| 1772 (2562.9585 kb) | 2469 (5300.757 kb) | lagging | -0.125 | |
| GC-skew reverse | 2470 (0 kb) | 3088 (2555.093 kb) | leading | 0.118 |
| 3089 (2557.905 kb) | 5134 (5300.757 kb) | lagging | -0.311 | |
| AT-skew forward | 1 (0 kb) | 1633 (2373.1535 kb) | leading | 0.037 |
| 1634 (2376.467 kb) | 2469 (5300.757 kb) | NA | 0 | |
| AT-skew reverse | 2470 (0 kb) | 3185 (2681.4695 kb) | leading | 0.002 |
| 3186 (2682.446 kb) | 5134 (5300.757 kb) | lagging | -0.034 |
More G than C on the leading strand for replication.