Rearranged Oriloc output example: Previous Index Next
Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.
Genome size (bp): 3131724
Number of genes 3131
Oriloc predictions: Origin 2402 kb Terminus 786 kb
Worning et al., 2006: Origin 1471 kb Terminus 2412 kb
Position(s) of the ORC/Cdc6 gene(s): 2124.86 kb, 482.97 kb, 684.65 kb, 697.94 kb, 938.04 kb, 1129.35 kb, 1361.24 kb, 1402.02 kb, 1403.19 kb, 2065.9 kb, 2124.86 kb, 2414.82 kb, 2461.99 kb, 2542.96 kb
Consensus predictions: Origin 2402 kb Terminus 786 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 211 | 0.25 | 430 |
| 1059 | 0.27 | 2205 | |
| 211 | 0.25 | 430 | |
| 1059 | 0.27 | 2205 | |
| GC-skew reverse | 1752 | 0.63667 | 477 |
| 2258 | 0.25333 | 1432 | |
| AT-skew forward | 323 | 0.21 | 654 |
| 1133 | 0.00667 | 2353 | |
| AT-skew reverse | 1952 | 0.44889 | 833 |
| 2433 | 0.06222 | 1766 | |
| 2744 | 0.00444 | 2383 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 211 (429.88 kb) | leading | -0.16 |
| 212 (430.553 kb) | 211 (429.88 kb) | leading | 0.046 | |
| 212 (430.553 kb) | 1059 (2205.091 kb) | NA | -0.133 | |
| 1060 (2209.019 kb) | 1059 (2205.091 kb) | lagging | 0.103 | |
| 1060 (2209.019 kb) | 1523 (3131.71 kb) | NA | -0.16 | |
| GC-skew reverse | 1524 (0 kb) | 1752 (476.7125 kb) | leading | 0.14 |
| 1753 (480.0495 kb) | 2258 (1432.4445 kb) | NA | 0.127 | |
| 2259 (1432.9865 kb) | 3131 (3131.71 kb) | NA | 0.154 | |
| AT-skew forward | 1 (0 kb) | 323 (654.352 kb) | leading | -0.029 |
| 324 (660.357 kb) | 1133 (2352.695 kb) | lagging | 0.016 | |
| 1134 (2353.162 kb) | 1523 (3131.71 kb) | leading | -0.075 | |
| AT-skew reverse | 1524 (0 kb) | 1952 (833.2865 kb) | leading | -0.004 |
| 1953 (834.9045 kb) | 2433 (1765.5575 kb) | lagging | 0.03 | |
| 2434 (1767.34 kb) | 2744 (2383.1365 kb) | lagging | 0.11 | |
| 2745 (2384.2265 kb) | 3131 (3131.71 kb) | leading | -0.032 |