Rearranged Oriloc output example: Previous Index Next
9150 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.
Genome size (bp): 4585229
Number of genes 4092
Oriloc predictions: Origin 3857 kb Terminus 1409 kb
Worning et al., 2006: Origin 3859 kb Terminus 1363 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 3859.119 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 437.14 kb, 3826.28 kb
Consensus predictions: Origin 3857 kb Terminus 1409 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 726 | NA | 1387 |
| GC-skew reverse | 2510 | NA | 1424 |
| 3826 | NA | 3893 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 726 (1387.273 kb) | leading | 0.115 |
| 727 (1388.961 kb) | 2010 (4585.202 kb) | NA | 0.015 | |
| GC-skew reverse | 2011 (0 kb) | 2510 (1423.845 kb) | leading | 0.017 |
| 2511 (1425.917 kb) | 3826 (3893.4235 kb) | lagging | -0.11 | |
| 3827 (3897.7285 kb) | 4092 (4585.202 kb) | leading | 0.022 |