Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.
Genome size (bp): 2906179
Number of genes 2575
Oriloc predictions: Origin 0 kb Terminus 1463 kb
Worning et al., 2006: Origin 6 kb Terminus 1448 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2756.972 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 8.11 kb
Consensus predictions: Origin 0 kb Terminus 1463 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 764 | NA | 1443 |
| GC-skew reverse | 1792 | NA | 1447 |
| AT-skew forward | 95 | NA | 185 |
| 199 | NA | 312 | |
| 516 | NA | 944 | |
| 808 | NA | 1568 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 764 (1443.327 kb) | leading | 0.129 |
| 765 (1445.069 kb) | 1266 (2906.068 kb) | lagging | -0.151 | |
| GC-skew reverse | 1267 (0 kb) | 1792 (1446.6805 kb) | leading | 0.163 |
| 1793 (1447.5885 kb) | 2575 (2906.068 kb) | lagging | -0.16 | |
| AT-skew forward | 1 (0 kb) | 95 (185.2495 kb) | leading | -0.081 |
| 96 (186.3845 kb) | 199 (312.3855 kb) | leading | -0.157 | |
| 200 (313.71 kb) | 516 (943.6885 kb) | leading | -0.114 | |
| 517 (944.874 kb) | 808 (1567.668 kb) | leading | -0.092 | |
| 809 (1571.0365 kb) | 1266 (2906.068 kb) | lagging | -0.063 |
More G than C on the leading strand for replication.