Rearranged Oriloc output example: Previous Index Next
Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia.
Genome size (bp): 1044459
Number of genes 910
Oriloc predictions: Origin 721 kb Terminus 199 kb
Worning et al., 2006: Origin 723 kb Terminus 197 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 67.641 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 282.83 kb, 309.37 kb
Consensus predictions: Origin 721 kb Terminus 199 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 103 | NA | 198 |
| 313 | NA | 717 | |
| GC-skew reverse | 538 | NA | 204 |
| 799 | NA | 730 | |
| AT-skew forward | 67 | NA | 141 |
| 350 | NA | 790 | |
| AT-skew reverse | 561 | NA | 256 |
| 788 | NA | 706 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 103 (198.004 kb) | leading | 0.231 |
| 104 (201.349 kb) | 313 (716.594 kb) | lagging | -0.219 | |
| 314 (719.399 kb) | 453 (1044.185 kb) | leading | 0.241 | |
| GC-skew reverse | 454 (0 kb) | 538 (203.8885 kb) | leading | 0.155 |
| 539 (204.7255 kb) | 799 (729.5355 kb) | lagging | -0.252 | |
| 800 (733.5895 kb) | 910 (1044.185 kb) | leading | 0.161 | |
| AT-skew forward | 1 (0 kb) | 67 (140.5995 kb) | leading | -0.152 |
| 68 (142.086 kb) | 350 (790.2925 kb) | NA | -0.081 | |
| 351 (791.478 kb) | 453 (1044.185 kb) | leading | -0.137 | |
| AT-skew reverse | 454 (0 kb) | 561 (256.237 kb) | NA | 0.095 |
| 562 (257.0545 kb) | 788 (705.6485 kb) | lagging | 0.15 | |
| 789 (709.404 kb) | 910 (1044.185 kb) | leading | 0.082 |
More G than C on the leading strand for replication.