Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
Genome size (bp): 5065741
Number of genes 5066
Oriloc predictions: Origin 4191 kb Terminus 1626 kb
Worning et al., 2006: Origin 4186 kb Terminus 1601 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2037.206 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 4144.6 kb
Consensus predictions: Origin 4191 kb Terminus 1626 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 916 | NA | 1684 |
| 2020 | NA | 4229 | |
| GC-skew reverse | 3209 | NA | 1651 |
| 4606 | NA | 4137 | |
| AT-skew forward | 1079 | NA | 2017 |
| 1994 | NA | 4164 | |
| AT-skew reverse | 3362 | NA | 1934 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 916 (1683.722 kb) | leading | 0.098 |
| 917 (1687.4815 kb) | 2020 (4229.016 kb) | lagging | -0.002 | |
| 2021 (4230.0765 kb) | 2424 (5065.714 kb) | leading | 0.084 | |
| GC-skew reverse | 2425 (0 kb) | 3209 (1651.014 kb) | leading | 0.014 |
| 3210 (1651.9535 kb) | 4606 (4137.2815 kb) | lagging | -0.083 | |
| 4607 (4138.3765 kb) | 5066 (5065.714 kb) | leading | -0.004 | |
| AT-skew forward | 1 (0 kb) | 1079 (2017.1065 kb) | NA | -0.18 |
| 1080 (2023.8325 kb) | 1994 (4163.5715 kb) | lagging | -0.153 | |
| 1995 (4172.0245 kb) | 2424 (5065.714 kb) | leading | -0.195 | |
| AT-skew reverse | 2425 (0 kb) | 3362 (1933.5335 kb) | NA | 0.155 |
| 3363 (1934.099 kb) | 5066 (5065.714 kb) | NA | 0.193 |