Rearranged Oriloc output example: Previous Index Next
Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.
Genome size (bp): 1860725
Number of genes 1854
Oriloc predictions: Origin 156 kb Terminus 1076 kb
Worning et al., 2006: Origin 164 kb Terminus 892 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1798.282 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 944.91 kb
Consensus predictions: Origin 156 kb Terminus 1076 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 526 | 0.00667 | 916 |
| GC-skew reverse | 1344 | 0 | 852 |
| AT-skew forward | 762 | 0.01333 | 1385 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 526 (916.348 kb) | leading | 0.037 |
| 527 (916.979 kb) | 1007 (1860.498 kb) | lagging | -0.013 | |
| GC-skew reverse | 1008 (0 kb) | 1344 (851.633 kb) | NA | 0.039 |
| 1345 (863.6995 kb) | 1854 (1860.498 kb) | NA | -0.018 | |
| AT-skew forward | 1 (0 kb) | 762 (1384.94 kb) | NA | 0.053 |
| 763 (1385.536 kb) | 1007 (1860.498 kb) | lagging | 0.102 |