Rearranged Oriloc output example: Previous Index Next




Bacteria; Cyanobacteria; Chroococcales; Thermosynechococcus.
Genome size (bp): 2593857
Number of genes 2475
Oriloc predictions: Origin NA Terminus NA
Worning et al., 2006: Origin 441 kb Terminus 1534 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2339.219 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 610.67 kb
Consensus predictions: Origin 2339 kb Terminus 1125 kb
Significant breakpoints (p-value <0.05):
Breakpoints P-value Chromosome coordinate (kb)
AT-skew forward1810.04667334
Segments:
From (index/coord) To (index/coord) StrandSlope
AT-skew forward 1 (0 kb)181 (333.756 kb) leading-0.186
182 (334.583 kb)1276 (2593.504 kb) NA-0.221