Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.
Genome size (bp): 7036071
Number of genes 6743
Oriloc predictions: Origin NA Terminus NA
Worning et al., 2006: Origin 4738 kb Terminus 299 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 4479.559 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 4478.17 kb
Consensus predictions: Origin 4479 kb Terminus 146 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 1973 | NA | 4322 |
| 2585 | NA | 5590 | |
| AT-skew forward | 1584 | NA | 3466 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 1973 (4321.926 kb) | lagging | -0.152 |
| 1974 (4323.312 kb) | 2585 (5590.0685 kb) | leading | -0.075 | |
| 2586 (5590.8725 kb) | 3374 (7035.848 kb) | leading | -0.11 | |
| AT-skew forward | 1 (0 kb) | 1584 (3465.658 kb) | lagging | -0.185 |
| 1585 (3467.7155 kb) | 3374 (7035.848 kb) | NA | -0.227 |