Rearranged Oriloc output example: Previous Index Next
Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.
Genome size (bp): 1584804
Number of genes 1492
Oriloc predictions: Origin 27 kb Terminus 914 kb
Worning et al., 2006: Origin 185 kb Terminus 952 kb
Position(s) of the ORC/Cdc6 gene(s): 772.43 kb
Consensus predictions: Origin 27 kb Terminus 914 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 464 | NA | 871 |
| 703 | NA | 1452 | |
| AT-skew forward | 489 | NA | 933 |
| AT-skew reverse | 934 | NA | 401 |
| 1121 | NA | 877 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 464 (870.517 kb) | leading | 0.07 |
| 465 (870.804 kb) | 703 (1452.241 kb) | lagging | -0.015 | |
| 704 (1455.728 kb) | 753 (1584.691 kb) | lagging | 0.023 | |
| AT-skew forward | 1 (0 kb) | 489 (933.016 kb) | leading | 0.043 |
| 490 (936.2025 kb) | 753 (1584.691 kb) | lagging | 0.066 | |
| AT-skew reverse | 754 (0 kb) | 934 (401.017 kb) | leading | -0.066 |
| 935 (401.761 kb) | 1121 (877.4665 kb) | leading | -0.074 | |
| 1122 (877.936 kb) | 1492 (1584.691 kb) | lagging | -0.013 |
More G than C on the leading strand for replication - for forward encoded genes.