Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus.
Genome size (bp): 1852441
Number of genes 1697
Oriloc predictions: Origin 0 kb Terminus 967 kb
Worning et al., 2006: Origin NA kb Terminus NA kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1757.8 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.91 kb
Consensus predictions: Origin 0 kb Terminus 967 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 749 | NA | 966 |
| GC-skew reverse | 1100 | NA | 970 |
| 1294 | NA | 1225 | |
| 1599 | NA | 1651 | |
| AT-skew forward | 182 | NA | 252 |
| 582 | NA | 775 | |
| 635 | NA | 820 | |
| AT-skew reverse | 1247 | NA | 1190 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 749 (966.2665 kb) | leading | 0.049 |
| 750 (966.6215 kb) | 949 (1852.437 kb) | lagging | -0.211 | |
| GC-skew reverse | 950 (0 kb) | 1100 (969.966 kb) | leading | 0.2 |
| 1101 (974.576 kb) | 1294 (1225.4165 kb) | lagging | -0.069 | |
| 1295 (1226.8665 kb) | 1599 (1650.879 kb) | lagging | -0.052 | |
| 1600 (1653.1525 kb) | 1697 (1852.437 kb) | lagging | 0.001 | |
| AT-skew forward | 1 (0 kb) | 182 (251.957 kb) | leading | -0.135 |
| 183 (252.426 kb) | 582 (774.6165 kb) | leading | -0.114 | |
| 583 (775.7715 kb) | 635 (819.8745 kb) | leading | 0.02 | |
| 636 (820.8995 kb) | 949 (1852.437 kb) | NA | -0.138 | |
| AT-skew reverse | 950 (0 kb) | 1247 (1189.719 kb) | NA | 0.139 |
| 1248 (1192.0845 kb) | 1697 (1852.437 kb) | lagging | 0.113 |