Rearranged Oriloc output example: Previous Index Next
Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.
Genome size (bp): 2154946
Number of genes 2252
Oriloc predictions: Origin 0 kb Terminus 1000 kb
Worning et al., 2006: Origin 2152 kb Terminus 1018 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 3.148 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 2.14 kb
Consensus predictions: Origin 0 kb Terminus 1000 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 610 | NA | 1031 |
| GC-skew reverse | 1598 | NA | 1033 |
| AT-skew forward | 598 | NA | 1006 |
| AT-skew reverse | 1587 | NA | 1018 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 610 (1031.149 kb) | leading | -0.015 |
| 611 (1032.23 kb) | 1131 (2154.932 kb) | lagging | -0.181 | |
| GC-skew reverse | 1132 (0 kb) | 1598 (1033.4485 kb) | leading | 0.144 |
| 1599 (1035.4035 kb) | 2252 (2154.932 kb) | lagging | 0.028 | |
| AT-skew forward | 1 (0 kb) | 598 (1006.244 kb) | leading | -0.267 |
| 599 (1009.84 kb) | 1131 (2154.932 kb) | lagging | 0.035 | |
| AT-skew reverse | 1132 (0 kb) | 1587 (1018.1655 kb) | leading | -0.031 |
| 1588 (1018.972 kb) | 2252 (2154.932 kb) | lagging | 0.253 |
More G than C on the leading strand for replication.