Rearranged Oriloc output example: Previous Index Next
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.
Genome size (bp): 4345492
Number of genes 3920
Oriloc predictions: Origin 0 kb Terminus 2204 kb
Worning et al., 2006: Origin 2 kb Terminus 2127 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 60.159 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.76 kb
Consensus predictions: Origin 0 kb Terminus 2204 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 1123 | NA | 2099 |
| GC-skew reverse | 2782 | NA | 2208 |
| 3282 | NA | 3091 | |
| 3745 | NA | 3990 | |
| AT-skew forward | 827 | NA | 1574 |
| 1117 | NA | 2091 | |
| AT-skew reverse | 2794 | NA | 2230 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 1123 (2099.1455 kb) | leading | -0.02 |
| 1124 (2099.714 kb) | 1967 (4344.889 kb) | lagging | -0.101 | |
| GC-skew reverse | 1968 (0 kb) | 2782 (2207.8225 kb) | leading | 0.109 |
| 2783 (2210.0625 kb) | 3282 (3091.1685 kb) | lagging | 0.021 | |
| 3283 (3092.037 kb) | 3745 (3990.4845 kb) | lagging | 0.008 | |
| 3746 (3991.4685 kb) | 3920 (4344.889 kb) | lagging | -0.017 | |
| AT-skew forward | 1 (0 kb) | 827 (1573.878 kb) | leading | -0.187 |
| 828 (1576.391 kb) | 1117 (2090.542 kb) | leading | -0.123 | |
| 1118 (2091.2255 kb) | 1967 (4344.889 kb) | lagging | -0.04 | |
| AT-skew reverse | 1968 (0 kb) | 2794 (2229.598 kb) | leading | 0.041 |
| 2795 (2232.6295 kb) | 3920 (4344.889 kb) | lagging | 0.18 |
More G than C on the leading strand for replication.