Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Staphylococcus.
Genome size (bp): 2616530
Number of genes 2493
Oriloc predictions: Origin 0 kb Terminus 1185 kb
Worning et al., 2006: Origin 0 kb Terminus 995 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 0.125 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1285.49 kb, 2615.65 kb
Consensus predictions: Origin 0 kb Terminus 1185 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 727 | NA | 1243 |
| GC-skew reverse | 1432 | NA | 1121 |
| 2258 | NA | 2222 | |
| AT-skew forward | 485 | NA | 713 |
| 676 | NA | 956 | |
| AT-skew reverse | 1320 | NA | 839 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 727 (1243.462 kb) | leading | 0.108 |
| 728 (1252.361 kb) | 1098 (2616.331 kb) | lagging | -0.112 | |
| GC-skew reverse | 1099 (0 kb) | 1432 (1121.226 kb) | leading | 0.091 |
| 1433 (1122.045 kb) | 2258 (2221.931 kb) | lagging | -0.103 | |
| 2259 (2223.144 kb) | 2493 (2616.331 kb) | lagging | -0.146 | |
| AT-skew forward | 1 (0 kb) | 485 (712.9755 kb) | leading | -0.042 |
| 486 (714.834 kb) | 676 (956.053 kb) | leading | -0.009 | |
| 677 (957.0515 kb) | 1098 (2616.331 kb) | lagging | -0.061 | |
| AT-skew reverse | 1099 (0 kb) | 1320 (838.5435 kb) | leading | 0.057 |
| 1321 (876.3645 kb) | 2493 (2616.331 kb) | NA | 0.011 |
More G than C on the leading strand for replication.