Rearranged Oriloc output example: Previous Index Next
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Streptomycineae; Streptomycetaceae; Streptomyces.
Genome size (bp): 9025608
Number of genes 7577
Oriloc predictions: Origin 4982 kb Terminus 0 kb
Worning et al., 2006: Origin NA kb Terminus NA kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 5308.401 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 3685.51 kb, 4616.8 kb, 4908.87 kb, 5286.95 kb
Consensus predictions: Origin 5308 kb Terminus 0 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 2804 | 0 | 7274 |
| GC-skew reverse | 4934 | 0.02333 | 2839 |
| 6781 | 0.04333 | 6983 | |
| AT-skew forward | 1836 | 0.02667 | 5194 |
| 2602 | 0.01667 | 6741 | |
| AT-skew reverse | 4717 | 0.02667 | 2333 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 2804 (7274.0665 kb) | NA | -0.108 |
| 2805 (7276.519 kb) | 3697 (9024.537 kb) | leading | -0.16 | |
| GC-skew reverse | 3698 (0 kb) | 4934 (2838.684 kb) | lagging | 0.16 |
| 4935 (2843.069 kb) | 6781 (6982.5085 kb) | NA | 0.117 | |
| 6782 (6983.572 kb) | 7577 (9024.537 kb) | leading | 0.078 | |
| AT-skew forward | 1 (0 kb) | 1836 (5193.527 kb) | lagging | -0.046 |
| 1837 (5197.487 kb) | 2602 (6740.525 kb) | leading | -0.144 | |
| 2603 (6741.757 kb) | 3697 (9024.537 kb) | leading | -0.041 | |
| AT-skew reverse | 3698 (0 kb) | 4717 (2332.79 kb) | lagging | 0.021 |
| 4718 (2341.106 kb) | 7577 (9024.537 kb) | NA | 0.076 |