Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.
Genome size (bp): 4857432
Number of genes 4425
Oriloc predictions: Origin 4082 kb Terminus 1635 kb
Worning et al., 2006: Origin 4081 kb Terminus 1604 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 4084.1 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 2610.22 kb, 4044.32 kb
Consensus predictions: Origin 4082 kb Terminus 1635 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 860 | NA | 1621 |
| GC-skew reverse | 2752 | NA | 1627 |
| 4119 | NA | 4093 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 860 (1620.7255 kb) | leading | 0.114 |
| 861 (1624.776 kb) | 2115 (4857.405 kb) | NA | 0.017 | |
| GC-skew reverse | 2116 (0 kb) | 2752 (1626.8275 kb) | leading | 0.03 |
| 2753 (1629.3565 kb) | 4119 (4093.344 kb) | lagging | -0.105 | |
| 4120 (4098.581 kb) | 4425 (4857.405 kb) | leading | 0.022 |