Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.
Genome size (bp): 4791961
Number of genes 4317
Oriloc predictions: Origin 3750 kb Terminus 1493 kb
Worning et al., 2006: Origin 3751 kb Terminus 1517 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 3750.614 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 430.91 kb, 3791.32 kb
Consensus predictions: Origin 3750 kb Terminus 1493 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 722 | NA | 1319 |
| GC-skew reverse | 2808 | NA | 1531 |
| 3877 | NA | 3594 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 722 (1319.165 kb) | leading | 0.115 |
| 723 (1327.581 kb) | 2243 (4791.934 kb) | NA | 0.033 | |
| GC-skew reverse | 2244 (0 kb) | 2808 (1530.838 kb) | leading | 0.021 |
| 2809 (1539.024 kb) | 3877 (3594.154 kb) | lagging | -0.113 | |
| 3878 (3595.2 kb) | 4317 (4791.934 kb) | leading | -0.021 |