Rearranged Oriloc output example: Previous Index Next
Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila.
Genome size (bp): 1166239
Number of genes 1005
Oriloc predictions: Origin 4 kb Terminus 583 kb
Worning et al., 2006: Origin 9 kb Terminus 585 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 834.256 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 628.12 kb, 743.51 kb
Consensus predictions: Origin 0 kb Terminus 583 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 246 | NA | 575 |
| GC-skew reverse | 630 | NA | 323 |
| 742 | NA | 585 | |
| 820 | NA | 762 | |
| AT-skew forward | 250 | NA | 582 |
| AT-skew reverse | 747 | NA | 592 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 246 (574.893 kb) | leading | 0.146 |
| 247 (576.994 kb) | 495 (1166.159 kb) | lagging | -0.177 | |
| GC-skew reverse | 496 (0 kb) | 630 (322.862 kb) | leading | 0.133 |
| 631 (324.3555 kb) | 742 (584.8685 kb) | leading | 0.204 | |
| 743 (586.553 kb) | 820 (761.9185 kb) | lagging | -0.206 | |
| 821 (762.9495 kb) | 1005 (1166.159 kb) | lagging | -0.101 | |
| AT-skew forward | 1 (0 kb) | 250 (582.3145 kb) | leading | -0.146 |
| 251 (583.5945 kb) | 495 (1166.159 kb) | lagging | -0.059 | |
| AT-skew reverse | 496 (0 kb) | 747 (591.8665 kb) | leading | 0.054 |
| 748 (592.565 kb) | 1005 (1166.159 kb) | lagging | 0.132 |
More G than C on the leading strand for replication.