Rearranged Oriloc output example: Previous Index Next
Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.
Genome size (bp): 4096345
Number of genes 3370
Oriloc predictions: Origin 1564 kb Terminus 3624 kb
Worning et al., 2006: Origin 1573 kb Terminus 94 kb
Position(s) of the ORC/Cdc6 gene(s): 570.09 kb, 1655.64 kb, 2187.55 kb
Consensus predictions: Origin 1564 kb Terminus 3624 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 925 | NA | 2169 |
| 1104 | NA | 2562 | |
| GC-skew reverse | 2045 | NA | 695 |
| 2949 | NA | 2991 | |
| AT-skew forward | 646 | NA | 1550 |
| 1044 | NA | 2458 | |
| 1515 | NA | 3574 | |
| AT-skew reverse | 2381 | NA | 1577 |
| 2865 | NA | 2798 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 925 (2168.8935 kb) | NA | -0.031 |
| 926 (2171.7575 kb) | 1104 (2562.0095 kb) | leading | -0.05 | |
| 1105 (2566.0515 kb) | 1718 (4096.173 kb) | NA | 0.001 | |
| GC-skew reverse | 1719 (0 kb) | 2045 (695.3495 kb) | lagging | 0.016 |
| 2046 (696.607 kb) | 2949 (2990.5275 kb) | NA | 0.049 | |
| 2950 (2992.471 kb) | 3370 (4096.173 kb) | NA | 0.012 | |
| AT-skew forward | 1 (0 kb) | 646 (1549.585 kb) | lagging | 0.052 |
| 647 (1550.551 kb) | 1044 (2457.689 kb) | leading | -0.075 | |
| 1045 (2458.404 kb) | 1515 (3574.0565 kb) | leading | -0.035 | |
| 1516 (3575.195 kb) | 1718 (4096.173 kb) | lagging | -0.002 | |
| AT-skew reverse | 1719 (0 kb) | 2381 (1577.3975 kb) | lagging | 0.077 |
| 2382 (1578.342 kb) | 2865 (2797.938 kb) | leading | -0.06 | |
| 2866 (2802.044 kb) | 3370 (4096.173 kb) | NA | 0.005 |