Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Oceanobacillus.
Genome size (bp): 3630528
Number of genes 3500
Oriloc predictions: Origin 0 kb Terminus 1785 kb
Worning et al., 2006: Origin 3630 kb Terminus 1722 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 3627.341 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.97 kb, 1797.38 kb, 2190.32 kb
Consensus predictions: Origin 0 kb Terminus 1785 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 98 | 0 | 125 |
| 140 | 0 | 158 | |
| 1313 | 0 | 1790 | |
| GC-skew reverse | 2230 | 0 | 1838 |
| AT-skew reverse | 1988 | 0.03333 | 1034 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 98 (125.168 kb) | leading | 0.244 |
| 99 (125.767 kb) | 140 (158.017 kb) | leading | -0.129 | |
| 141 (158.8245 kb) | 1313 (1789.5135 kb) | leading | 0.248 | |
| 1314 (1793.543 kb) | 1743 (3630.057 kb) | lagging | 0.006 | |
| GC-skew reverse | 1744 (0 kb) | 2230 (1838.074 kb) | leading | 0 |
| 2231 (1839.262 kb) | 3500 (3630.057 kb) | lagging | -0.238 | |
| AT-skew reverse | 1744 (0 kb) | 1988 (1034.004 kb) | leading | 0 |
| 1989 (1035.038 kb) | 3500 (3630.057 kb) | lagging | -0.018 |
More G than C on the leading strand for replication.