Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Candidatus Phytoplasma; Candidatus Phytoplasma asteris.
Genome size (bp): 860631
Number of genes 754
Oriloc predictions: Origin NA Terminus NA
Worning et al., 2006: Origin 860 kb Terminus 335 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 234.659 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.76 kb, 772.01 kb
Consensus predictions: Origin 6 kb Terminus 406 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 148 | 0.01333 | 201 |
| GC-skew reverse | 554 | 0.04667 | 441 |
| AT-skew forward | 274 | 0.02 | 376 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 148 (200.8415 kb) | leading | -0.11 |
| 149 (201.886 kb) | 469 (859.601 kb) | NA | -0.253 | |
| GC-skew reverse | 470 (0 kb) | 554 (441.0875 kb) | NA | 0.397 |
| 555 (441.6905 kb) | 754 (859.601 kb) | lagging | 0.236 | |
| AT-skew forward | 1 (0 kb) | 274 (375.788 kb) | leading | -0.047 |
| 275 (376.885 kb) | 469 (859.601 kb) | lagging | 0.029 |