Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.
Genome size (bp): 4595065
Number of genes 3895
Oriloc predictions: Origin NA Terminus NA
Worning et al., 2006: Origin 4592 kb Terminus 2733 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 186.372 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 2983.32 kb, 4560.13 kb
Consensus predictions: Origin NA Terminus NA
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 394 | NA | 759 |
| GC-skew reverse | 2326 | NA | 955 |
| AT-skew forward | 443 | NA | 834 |
| 1549 | NA | 3491 | |
| 1773 | NA | 4031 | |
| AT-skew reverse | 2316 | NA | 938 |
| 2702 | NA | 1775 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 394 (758.729 kb) | NA | 0.107 |
| 395 (759.73 kb) | 1965 (4594.786 kb) | NA | 0.056 | |
| GC-skew reverse | 1966 (0 kb) | 2326 (955.117 kb) | NA | 0.011 |
| 2327 (955.475 kb) | 3895 (4594.786 kb) | NA | -0.062 | |
| AT-skew forward | 1 (0 kb) | 443 (834.1105 kb) | NA | -0.204 |
| 444 (835.0675 kb) | 1549 (3491.4295 kb) | NA | -0.151 | |
| 1550 (3494.417 kb) | 1773 (4031.2675 kb) | NA | -0.181 | |
| 1774 (4032.716 kb) | 1965 (4594.786 kb) | NA | -0.123 | |
| AT-skew reverse | 1966 (0 kb) | 2316 (937.574 kb) | NA | 0.116 |
| 2317 (938.8205 kb) | 2702 (1774.868 kb) | NA | 0.165 | |
| 2703 (1776.108 kb) | 3895 (4594.786 kb) | NA | 0.177 |