Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.
Genome size (bp): 2325379
Number of genes 2029
Oriloc predictions: Origin 6 kb Terminus 1088 kb
Worning et al., 2006: Origin 4 kb Terminus 1089 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 856.553 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): NA
Consensus predictions: Origin 0 kb Terminus 1088 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 548 | NA | 1073 |
| GC-skew reverse | 1446 | NA | 1042 |
| 1654 | NA | 1549 | |
| AT-skew forward | 560 | NA | 1092 |
| AT-skew reverse | 1468 | NA | 1104 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 548 (1073.254 kb) | leading | 0.03 |
| 549 (1074.07 kb) | 1020 (2324.451 kb) | lagging | -0.066 | |
| GC-skew reverse | 1021 (0 kb) | 1446 (1042.0975 kb) | leading | 0.067 |
| 1447 (1042.4855 kb) | 1654 (1549.3515 kb) | lagging | 0.007 | |
| 1655 (1568.6775 kb) | 2029 (2324.451 kb) | lagging | -0.012 | |
| AT-skew forward | 1 (0 kb) | 560 (1092.239 kb) | leading | -0.252 |
| 561 (1095.5475 kb) | 1020 (2324.451 kb) | lagging | -0.085 | |
| AT-skew reverse | 1021 (0 kb) | 1468 (1104.4155 kb) | leading | 0.055 |
| 1469 (1107.213 kb) | 2029 (2324.451 kb) | lagging | 0.242 |
More G than C on the leading strand for replication.