Rearranged Oriloc output example: Previous Index Next
Bacteria; Chloroflexi; Dehalococcoidetes; Dehalococcoides.
Genome size (bp): 1395502
Number of genes 1458
Oriloc predictions: Origin 0 kb Terminus 724 kb
Worning et al., 2006: Origin 1 kb Terminus 725 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 852.281 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.93 kb
Consensus predictions: Origin 0 kb Terminus 724 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 361 | 0 | 696 |
| GC-skew reverse | 1050 | 0.00667 | 660 |
| AT-skew forward | 62 | 0.03333 | 151 |
| 376 | 0.00667 | 720 | |
| AT-skew reverse | 1071 | 0 | 721 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 361 (696.4655 kb) | leading | 0.053 |
| 362 (697.701 kb) | 708 (1395.47 kb) | lagging | -0.112 | |
| GC-skew reverse | 709 (0 kb) | 1050 (659.93 kb) | leading | 0.143 |
| 1051 (661.281 kb) | 1458 (1395.47 kb) | lagging | -0.04 | |
| AT-skew forward | 1 (0 kb) | 62 (150.968 kb) | leading | -0.109 |
| 63 (151.5415 kb) | 376 (720.0955 kb) | leading | -0.199 | |
| 377 (720.621 kb) | 708 (1395.47 kb) | lagging | -0.028 | |
| AT-skew reverse | 709 (0 kb) | 1071 (720.7535 kb) | leading | 0.04 |
| 1072 (728.918 kb) | 1458 (1395.47 kb) | lagging | 0.181 |
More G than C on the leading strand for replication.