Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.
Genome size (bp): 3181762
Number of genes 2611
Oriloc predictions: Origin 1843 kb Terminus 89 kb
Worning et al., 2006: Origin 1842 kb Terminus 121 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2693.125 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): NA
Consensus predictions: Origin 1843 kb Terminus 89 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 645 | NA | 1778 |
| GC-skew reverse | 1658 | NA | 945 |
| 2142 | NA | 1856 | |
| AT-skew forward | 621 | NA | 1729 |
| AT-skew reverse | 2134 | NA | 1842 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 645 (1778.4525 kb) | lagging | -0.071 |
| 646 (1783.175 kb) | 1287 (3179.266 kb) | leading | 0.008 | |
| GC-skew reverse | 1288 (0 kb) | 1658 (945.0435 kb) | lagging | -0.024 |
| 1659 (946.451 kb) | 2142 (1856.0875 kb) | lagging | -0.008 | |
| 2143 (1857.189 kb) | 2611 (3179.266 kb) | leading | 0.073 | |
| AT-skew forward | 1 (0 kb) | 621 (1729.054 kb) | lagging | -0.074 |
| 622 (1731.644 kb) | 1287 (3179.266 kb) | leading | -0.253 | |
| AT-skew reverse | 1288 (0 kb) | 2134 (1842.1005 kb) | lagging | 0.231 |
| 2135 (1843.68 kb) | 2611 (3179.266 kb) | leading | 0.096 |
More G than C on the leading strand for replication.