Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae.
Genome size (bp): 2201561
Number of genes 2097
Oriloc predictions: Origin 17 kb Terminus 1132 kb
Worning et al., 2006: Origin 2186 kb Terminus 1133 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2073.631 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.67 kb
Consensus predictions: Origin 17 kb Terminus 1132 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 667 | NA | 1122 |
| GC-skew reverse | 1497 | NA | 1141 |
| AT-skew forward | 823 | NA | 1445 |
| AT-skew reverse | 1403 | NA | 828 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 667 (1122.45 kb) | leading | 0.157 |
| 668 (1123.4185 kb) | 1099 (2201.474 kb) | lagging | 0.007 | |
| GC-skew reverse | 1100 (0 kb) | 1497 (1141.1595 kb) | leading | 0.027 |
| 1498 (1142.0275 kb) | 2097 (2201.474 kb) | lagging | -0.14 | |
| AT-skew forward | 1 (0 kb) | 823 (1444.694 kb) | NA | -0.035 |
| 824 (1445.4465 kb) | 1099 (2201.474 kb) | lagging | -0.027 | |
| AT-skew reverse | 1100 (0 kb) | 1403 (828.2695 kb) | leading | 0.033 |
| 1404 (831.2045 kb) | 2097 (2201.474 kb) | lagging | 0.041 |
More G than C on the leading strand for replication.