ProbabilisticRewardMapping.cpp

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// SPDX-FileCopyrightText: The Bio++ Development Group
//
// SPDX-License-Identifier: CECILL-2.1
 
#include "ProbabilisticRewardMapping.h"
 
using namespace bpp;
using namespace std;
 
void ProbabilisticRewardMapping::setNumberOfSites(size_t numberOfSites)
{
  if (numberOfSites != getNumberOfSites() || (usePatterns_ && numberOfSites != numberOfDistinctSites_))
  {
    AbstractRewardMapping::setNumberOfSites(numberOfSites);
 
    numberOfDistinctSites_ = numberOfSites;
    usePatterns_ = false;
 
    unique_ptr<mapTree::EdgeIterator> nIT = allEdgesIterator();
 
    for ( ; !nIT->end(); nIT->next())
    {
      (**nIT)->setNumberOfSites(numberOfSites);
    }
  }
}