bpp-phyl3
3.0.0
|
#include <Bpp/App/ApplicationTools.h>
#include <Bpp/Numeric/DataTable.h>
#include <Bpp/Numeric/Matrix/MatrixTools.h>
#include <Bpp/Seq/AlphabetIndex/UserAlphabetIndex1.h>
#include <Bpp/Text/TextTools.h>
#include "../Likelihood/DataFlow/ForwardLikelihoodTree.h"
#include "DecompositionReward.h"
#include "DecompositionSubstitutionCount.h"
#include "ProbabilisticRewardMapping.h"
#include "ProbabilisticSubstitutionMapping.h"
#include "RewardMappingTools.h"
#include "SubstitutionMappingTools.h"
#include <iomanip>