bpp::AbstractOMultiPhyloDAG Class Reference

Partial implementation of the ODAG interface. More...

#include <Bpp/Phyl/Io/IoDAG.h>

Inheritance diagram for bpp::AbstractOMultiPhyloDAG:

Collaboration diagram for bpp::AbstractOMultiPhyloDAG:

Public Member Functions
	AbstractOMultiPhyloDAG ()
virtual	~AbstractOMultiPhyloDAG ()
virtual void	writePhyloDAGs (const std::vector< const PhyloDAG * > &dags, std::ostream &out) const =0
	Write dags to a stream. More...
virtual void	writePhyloDAGs (const std::vector< const PhyloDAG * > &dags, const std::string &path, bool overwrite) const
	Write dags to a file. More...
virtual const std::string	getDataType () const
virtual const std::string	getFormatName () const=0
virtual const std::string	getFormatDescription () const=0

Detailed Description

Partial implementation of the ODAG interface.

Definition at line 270 of file IoDAG.h.

Constructor & Destructor Documentation

AbstractOMultiPhyloDAG()

bpp::AbstractOMultiPhyloDAG::AbstractOMultiPhyloDAG ( )

inline

Definition at line 274 of file IoDAG.h.

~AbstractOMultiPhyloDAG()

virtual bpp::AbstractOMultiPhyloDAG::~AbstractOMultiPhyloDAG ( )

inlinevirtual

Definition at line 275 of file IoDAG.h.

Member Function Documentation

getDataType()

virtual const std::string bpp::IODAG::getDataType ( ) const

inlinevirtualinherited

Implements bpp::IOFormat.

Definition at line 48 of file IoDAG.h.

writePhyloDAGs() [1/2]

virtual void bpp::AbstractOMultiPhyloDAG::writePhyloDAGs ( const std::vector< const PhyloDAG * > &  dags, const std::string &  path, bool  overwrite  ) const

inlinevirtual

Write dags to a file.

Parameters

dags	A vector of dag objects.
path	The file path.
overwrite	Tell if existing file must be overwritten. Otherwise append to the file.

Implements bpp::OMultiPhyloDAG.

Reimplemented in bpp::ExtendedNewick.

Definition at line 280 of file IoDAG.h.

References writePhyloDAGs().

writePhyloDAGs() [2/2]

virtual void bpp::AbstractOMultiPhyloDAG::writePhyloDAGs ( const std::vector< const PhyloDAG * > &  dags, std::ostream &  out  ) const

pure virtual

Write dags to a stream.

Parameters

dags	A vector of dag objects.
out	The output stream.

Exceptions

Exception

If an error occurred.

Implements bpp::OMultiPhyloDAG.

Implemented in bpp::ExtendedNewick, and bpp::ExtendedNewick.

Referenced by writePhyloDAGs().

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The documentation for this class was generated from the following file:

• Bpp/Phyl/Io/IoDAG.h