Partial implementation of the OTree interface. More...

#include <Bpp/Phyl/Io/IoTree.h>

Inheritance diagram for bpp::AbstractOMultiTree:

Collaboration diagram for bpp::AbstractOMultiTree:

Public Member Functions
	AbstractOMultiTree ()

virtual	~AbstractOMultiTree ()

virtual void	writeTrees (const std::vector< const Tree * > &trees, std::ostream &out) const =0
	Write trees to a stream. More...

virtual void	writeTrees (const std::vector< const Tree * > &trees, const std::string &path, bool overwrite) const
	Write trees to a file. More...

virtual const std::string	getDataType () const

virtual const std::string	getFormatName () const=0

virtual const std::string	getFormatDescription () const=0

Detailed Description

Partial implementation of the OTree interface.

Definition at line 496 of file IoTree.h.

Constructor & Destructor Documentation

◆ AbstractOMultiTree()

bpp::AbstractOMultiTree::AbstractOMultiTree ( )

inline

Definition at line 500 of file IoTree.h.

◆ ~AbstractOMultiTree()

virtual bpp::AbstractOMultiTree::~AbstractOMultiTree ( )

inlinevirtual

Definition at line 501 of file IoTree.h.

Member Function Documentation

◆ getDataType()

virtual const std::string bpp::IOTree::getDataType ( ) const

inlinevirtualinherited

Implements bpp::IOFormat.

Definition at line 51 of file IoTree.h.

◆ writeTrees() [1/2]

virtual void bpp::AbstractOMultiTree::writeTrees	(	const std::vector< const Tree * > &	trees,
		const std::string &	path,
		bool	overwrite
	)		const

inlinevirtual

Write trees to a file.

Parameters

trees	A vector of tree objects.
path	The file path.
overwrite	Tell if existing file must be overwritten. Otherwise append to the file.

Exceptions

Exception If an error occurred.

Implements bpp::OMultiTree.

Reimplemented in bpp::Newick, bpp::NexusIOTree, and bpp::Nhx.

Definition at line 505 of file IoTree.h.

References writeTrees().

◆ writeTrees() [2/2]

virtual void bpp::AbstractOMultiTree::writeTrees	(	const std::vector< const Tree * > &	trees,
		std::ostream &	out
	)		const

pure virtual

Write trees to a stream.