- v -
- val : IntAndInt
- value_ : bpp::Value< T >
- vAP_ : bpp::HmmPhyloAlphabet
- variance_ : bpp::BioNJ
- vBotLik_ : bpp::LikelihoodCalculationOnABranch::RateCategoryEdge
- verbose : bpp::OptimizationTools::OptimizationOptions
- verbose_ : bpp::AbstractAgglomerativeDistanceMethod, bpp::AbstractHomogeneousTreeLikelihood, bpp::AbstractNonHomogeneousTreeLikelihood, bpp::BppOFrequencySetFormat, bpp::BppOSubstitutionModelFormat, bpp::DistanceEstimation, bpp::ExtendedNewick, bpp::Newick, bpp::NNITopologyListener2, bpp::NNITopologyListener, bpp::NNITopologySearch
- verboseLevel_ : bpp::AbstractTransitionModel
- verOrientation_ : bpp::AbstractDendrogramPlot
- vFreq_ : bpp::WordFromIndependentFrequencySet
- vGenerators_ : bpp::AbstractKroneckerWordSubstitutionModel
- vLikCal_ : bpp::AbstractPhyloLikelihoodSet, bpp::MultiProcessSequencePhyloLikelihood
- vMap_ : bpp::SubstitutionProcessSequenceSimulator
- vModel_ : bpp::CodonAdHocSubstitutionModel
- vModelPaths_ : bpp::ModelScenario
- VnestedPrefix_ : bpp::AbstractWordSubstitutionModel
- vNestedPrefix_ : bpp::WordFromIndependentFrequencySet
- vNumb_ : bpp::MixedSubstitutionModelSet::HyperNode::Node
- vNumbers_ : bpp::MixedSubstitutionModelSet::HyperNode
- vNumRegs_ : bpp::OneChangeRegisterTransitionModel
- vpHyperNodes_ : bpp::MixedSubstitutionModelSet
- vpos_ : bpp::Cursor
- vPowGen_ : bpp::AbstractSubstitutionModel
- vPriorBranch_ : bpp::GivenDataSubstitutionProcessSequenceSimulator, bpp::GivenDataSubstitutionProcessSiteSimulator
- vProbas_ : bpp::AbstractMixedTransitionModel
- vProc_ : bpp::OneProcessSequenceEvolution, bpp::PartitionSequenceEvolution
- vProcPos_ : bpp::PartitionProcessPhyloLikelihood
- Vrate_ : bpp::AbstractWordSubstitutionModel
- vRateCatEdges_ : bpp::LikelihoodCalculationOnABranch
- vRateCatTrees_ : bpp::LikelihoodCalculationSingleProcess
- vRates_ : bpp::AbstractMixedTransitionModel, bpp::RegisterRatesSubstitutionModel
- vRegStates_ : bpp::RegisterRatesSubstitutionModel
- vS_ : bpp::FullPerAACodonFrequencySet
- vSiteSim_ : bpp::GivenDataSubstitutionProcessSequenceSimulator
- vSize_ : bpp::PartitionSequenceEvolution
- VSubMod_ : bpp::AbstractWordSubstitutionModel
- vSubNb_ : bpp::ProcessComputationEdge
- vSubReg_ : bpp::VectorOfSubstitutionRegisters
- vTopLik_ : bpp::LikelihoodCalculationOnABranch::RateCategoryEdge
- vUnused_ : bpp::MixedSubstitutionModelSet::HyperNode