Maf Directory Reference

Directory dependency graph for Maf:

Files
file	AlignmentFilterMafIterator.cpp [code]
file	AlignmentFilterMafIterator.h [code]
file	BlockLengthMafIterator.h [code]
file	BlockMergerMafIterator.cpp [code]
file	BlockMergerMafIterator.h [code]
file	BlockSizeMafIterator.h [code]
file	ChromosomeMafIterator.cpp [code]
file	ChromosomeMafIterator.h [code]
file	ConcatenateMafIterator.cpp [code]
file	ConcatenateMafIterator.h [code]
file	CoordinatesOutputMafIterator.cpp [code]
file	CoordinatesOutputMafIterator.h [code]
file	CoordinateTranslatorMafIterator.cpp [code]
file	CoordinateTranslatorMafIterator.h [code]
file	DuplicateFilterMafIterator.cpp [code]
file	DuplicateFilterMafIterator.h [code]
file	EntropyFilterMafIterator.cpp [code]
file	EntropyFilterMafIterator.h [code]
file	FeatureExtractorMafIterator.cpp [code]
file	FeatureExtractorMafIterator.h [code]
file	FeatureFilterMafIterator.cpp [code]
file	FeatureFilterMafIterator.h [code]
file	FullGapFilterMafIterator.cpp [code]
file	FullGapFilterMafIterator.h [code]
file	IterationListener.cpp [code]
file	IterationListener.h [code]
file	MafBlock.h [code]
file	MafIterator.cpp [code]
file	MafIterator.h [code]
file	MafParser.cpp [code]
file	MafParser.h [code]
file	MafSequence.cpp [code]
file	MafSequence.h [code]
file	MafStatistics.cpp [code]
file	MafStatistics.h [code]
file	MaskFilterMafIterator.cpp [code]
file	MaskFilterMafIterator.h [code]
file	MsmcOutputMafIterator.cpp [code]
file	MsmcOutputMafIterator.h [code]
file	OrderFilterMafIterator.cpp [code]
file	OrderFilterMafIterator.h [code]
file	OrphanSequenceFilterMafIterator.cpp [code]
file	OrphanSequenceFilterMafIterator.h [code]
file	OutputAlignmentMafIterator.cpp [code]
file	OutputAlignmentMafIterator.h [code]
file	OutputMafIterator.cpp [code]
file	OutputMafIterator.h [code]
file	PlinkOutputMafIterator.cpp [code]
file	PlinkOutputMafIterator.h [code]
file	QualityFilterMafIterator.cpp [code]
file	QualityFilterMafIterator.h [code]
file	RemoveEmptySequencesMafIterator.cpp [code]
file	RemoveEmptySequencesMafIterator.h [code]
file	SequenceFilterMafIterator.cpp [code]
file	SequenceFilterMafIterator.h [code]
file	SequenceLDhotOutputMafIterator.cpp [code]
file	SequenceLDhotOutputMafIterator.h [code]
file	SequenceStatisticsMafIterator.cpp [code]
file	SequenceStatisticsMafIterator.h [code]
file	SequenceStreamToMafIterator.cpp [code]
file	SequenceStreamToMafIterator.h [code]
file	TableOutputMafIterator.cpp [code]
file	TableOutputMafIterator.h [code]
file	VcfOutputMafIterator.cpp [code]
file	VcfOutputMafIterator.h [code]
file	WindowSplitMafIterator.cpp [code]
file	WindowSplitMafIterator.h [code]