Here is a list of all class members with links to the classes they belong to:
- o -
- OAlignment()
: bpp::OAlignment
- object()
: bpp::MappedNamedContainer< T >
, bpp::NamedContainerInterface< T >
, bpp::PositionedContainerInterface< T >
, bpp::VectorPositionedContainer< T >
- ODistanceMatrix()
: bpp::ODistanceMatrix
- off()
: bpp::SwitchDeleter< T >
- on()
: bpp::SwitchDeleter< T >
- operator!=()
: bpp::AbstractSequencePositionIterator
, bpp::SequencePositionIterator
- operator()()
: bpp::CompressedVectorSiteContainer
, bpp::CruxSymbolListInterface
, bpp::DistanceMatrix
, bpp::IntSymbolList
, bpp::ProbabilisticSymbolList
, bpp::SequencedValuesContainer
, bpp::SwitchDeleter< T >
, bpp::TemplateSequenceDataInterface< HashType >
, bpp::TemplateVectorSequenceContainer< SequenceType >
, bpp::TemplateVectorSiteContainer< SiteType, SequenceType >
- operator+()
: bpp::SimpleSequencePositionIterator
- operator++()
: bpp::SequencePositionIterator
, bpp::SimpleSequencePositionIterator
- operator+=()
: bpp::SequencePositionIterator
, bpp::SimpleSequencePositionIterator
- operator-()
: bpp::SimpleSequencePositionIterator
- operator-=()
: bpp::SequencePositionIterator
, bpp::SimpleSequencePositionIterator
- operator<()
: bpp::SiteInterface
- operator=()
: bpp::AAIndex1Entry
, bpp::AAIndex2Entry
, bpp::AbstractAlphabet
, bpp::AbstractCoreSequence
, bpp::AbstractCoreSite
, bpp::AbstractSequencePositionIterator
, bpp::AbstractTemplateEventDrivenSymbolList< T >
, bpp::AbstractTemplateSequenceContainer< SequenceType, HashType >
, bpp::AbstractTemplateSiteContainerIterator< SiteType, SequenceType, HashType >
, bpp::AbstractTemplateSymbolList< T >
, bpp::AlphabetException
, bpp::AlphabetMismatchException
, bpp::BinaryAlphabet
, bpp::BLOSUM50
, bpp::BppOAlphabetIndex1Format
, bpp::BppOAlphabetIndex2Format
, bpp::CaseMaskedAlphabet
, bpp::CodonAlphabet
, bpp::CodonFromProteicAlphabetIndex1
, bpp::CodonFromProteicAlphabetIndex2
, bpp::CompressedVectorSiteContainer
, bpp::CoreSymbolListEditionEvent< T >
, bpp::DefaultAlphabet
, bpp::DefaultNucleotideScore
, bpp::DistanceMatrix
, bpp::DNA
, bpp::DNAToRNA
, bpp::EmptyContainerException
, bpp::EventDrivenIntSymbolList
, bpp::GranthamAAChemicalDistance
, bpp::IntegerAlphabet
, bpp::IntSymbolList
, bpp::LetterAlphabet
, bpp::LexicalAlphabet
, bpp::MappedNamedContainer< T >
, bpp::MiyataAAChemicalDistance
, bpp::NucleicAcidsReplication
, bpp::NucleicAlphabet
, bpp::NumericAlphabet
, bpp::ProbabilisticSequence
, bpp::ProbabilisticSite
, bpp::ProbabilisticSymbolList
, bpp::ProteicAlphabet
, bpp::ProteicAlphabetIndex1
, bpp::ProteicAlphabetIndex2
, bpp::RNA
, bpp::RNY
, bpp::Sequence
, bpp::SequenceException
, bpp::SequenceWalker
, bpp::SequenceWithAnnotation
, bpp::SequenceWithQuality
, bpp::SimpleCommentable
, bpp::SimpleIndexDistance
, bpp::SimpleScore
, bpp::Site
, bpp::SiteException
, bpp::TemplateAlignedSequenceContainer< SequenceType, SiteType >
, bpp::TemplateStreamSequenceIterator< SequenceType >
, bpp::TemplateVectorSequenceContainer< SequenceType >
, bpp::TemplateVectorSiteContainer< SiteType, SequenceType >
, bpp::UserAlphabetIndex1
, bpp::UserAlphabetIndex2
, bpp::VectorMappedContainer< T >
, bpp::VectorPositionedContainer< T >
, bpp::WordAlphabet
- operator==()
: bpp::AbstractSequencePositionIterator
, bpp::AlphabetState
, bpp::SequencePositionIterator
, bpp::SiteInterface
- operator[]()
: bpp::AbstractTemplateSymbolList< T >
, bpp::ProbabilisticSymbolList
, bpp::SequenceMask
, bpp::SequenceQuality
, bpp::TemplateCoreSymbolListInterface< T >
- OProbabilisticAlignment()
: bpp::OProbabilisticAlignment
- OProbabilisticSequence()
: bpp::OProbabilisticSequence
- OSequence()
: bpp::OSequence