bpp::AlphabetMismatchException Class Reference

Exception thrown when two alphabets do not match. More...

#include <Bpp/Seq/Alphabet/AlphabetExceptions.h>

Inheritance diagram for bpp::AlphabetMismatchException:

Collaboration diagram for bpp::AlphabetMismatchException:

Public Member Functions
	AlphabetMismatchException (const std::string &text, const Alphabet *alpha1, const Alphabet *alpha2)
	Build a new AlphabetMismatchException object. More...
	AlphabetMismatchException (const std::string &text, std::shared_ptr< const Alphabet > alpha1, std::shared_ptr< const Alphabet > alpha2)
	Build a new AlphabetMismatchException object. More...
	AlphabetMismatchException (const AlphabetMismatchException &ame)
AlphabetMismatchException &	operator= (const AlphabetMismatchException &ame)
virtual	~AlphabetMismatchException ()
const Alphabet *	getFirstAlphabet () const
	Get the first alphabet. More...
const Alphabet *	getSecondAlphabet () const
	Get the second alphabet. More...
const char *	what () const noexcept override
const std::string &	message () const noexcept

Private Attributes
const Alphabet *	alphabet1_
const Alphabet *	alphabet2_
std::string	message_

Detailed Description

Exception thrown when two alphabets do not match.

Typically, this may occur when you try to add a bad sequence to a container, or concatenate two kinds of sequences, and so on.

Definition at line 150 of file AlphabetExceptions.h.

Constructor & Destructor Documentation

AlphabetMismatchException() [1/3]

AlphabetMismatchException::AlphabetMismatchException	(	const std::string &	text,
		const Alphabet *	alpha1,
		const Alphabet *	alpha2
	)

Build a new AlphabetMismatchException object.

Parameters

text	A message to be passed to the exception hierarchy.
alpha1	A const pointer toward the first alphabet.
alpha2	A const pointer toward the second alphabet, i.e. the one which does not match with the first.

Definition at line 52 of file AlphabetExceptions.cpp.

AlphabetMismatchException() [2/3]

AlphabetMismatchException::AlphabetMismatchException	(	const std::string &	text,
		std::shared_ptr< const Alphabet >	alpha1,
		std::shared_ptr< const Alphabet >	alpha2
	)

Build a new AlphabetMismatchException object.

Parameters

text	A message to be passed to the exception hierarchy.
alpha1	A const smart pointer toward the first alphabet.
alpha2	A const smart pointer toward the second alphabet, i.e. the one which does not match with the first.

Definition at line 59 of file AlphabetExceptions.cpp.

AlphabetMismatchException() [3/3]

bpp::AlphabetMismatchException::AlphabetMismatchException ( const AlphabetMismatchException &  ame )

inline

Definition at line 182 of file AlphabetExceptions.h.

~AlphabetMismatchException()

virtual bpp::AlphabetMismatchException::~AlphabetMismatchException ( )

inlinevirtual

Definition at line 197 of file AlphabetExceptions.h.

Member Function Documentation

getFirstAlphabet()

const Alphabet* bpp::AlphabetMismatchException::getFirstAlphabet ( ) const

inline

Get the first alphabet.

Returns

A reference toward the first alphabet.

Definition at line 205 of file AlphabetExceptions.h.

References alphabet1_.

getSecondAlphabet()

const Alphabet* bpp::AlphabetMismatchException::getSecondAlphabet ( ) const

inline

Get the second alphabet.

Returns

A reference toward the seocnd alphabet.

Definition at line 212 of file AlphabetExceptions.h.

References alphabet2_.

operator=()

AlphabetMismatchException& bpp::AlphabetMismatchException::operator= ( const AlphabetMismatchException &  ame )

inline

Definition at line 188 of file AlphabetExceptions.h.

References alphabet1_, and alphabet2_.

Member Data Documentation

alphabet1_

const Alphabet* bpp::AlphabetMismatchException::alphabet1_

private

Definition at line 154 of file AlphabetExceptions.h.

Referenced by getFirstAlphabet(), and operator=().

alphabet2_

const Alphabet* bpp::AlphabetMismatchException::alphabet2_

private

Definition at line 155 of file AlphabetExceptions.h.

Referenced by getSecondAlphabet(), and operator=().

---

The documentation for this class was generated from the following files:

• Bpp/Seq/Alphabet/AlphabetExceptions.h
• Bpp/Seq/Alphabet/AlphabetExceptions.cpp