
11h-11h30 | Reception |
11h30-12h30 | A tourist guide through computational complexity |
| Stéphane Vialette - ENS Ulm, Paris | |
| Résumé | |
| Slides (in pdf) | |
12h30-14h | Lunch |
14h-15h | Efficient data structures for strings and sequences |
| Roberto Grossi - University of Pisa, Italy | |
15h-15h30 | Coffee break |
15h30-16h30 | Repeat analysis on a genomic scale |
| Jens Stoye - University of Bielefeld, Germany | |
| Abstract | |
| Slides (in pdf) | |
16h30-17h | Coffee break |
17h-18h | Some problems of tree pattern matching |
| Cédric Chauve - University of Quebec at Montreal | |
19h30 | Diner (approximate price: 25 Euros) |
9h-10h | Analysing haplotype data |
| Esko Ukkonen - University of Helsinki, Finland | |
| Abstract | |
10h-10h30 | Coffee break |
10h30-11h30 | Combinatorial problems in the analysis of human polymorphisms |
| Giuseppe Lancia - University of Udine, Italy | |
11h30-12h | Coffee break |
12h-13h | Various methods for the problem of assembling trees in a supertree |
| Vincent Berry - LIRMM, Montpellier | |
13h-14h30 | Lunch |
14h30-15h30 | Resolution of haplotypes from measured frequencies |
| Itsik Pe'er - Weizmann Institute of Science, Israel | |
| Abstract | |
15h30-16h | Coffee break |
16h-17h | Exploring complex phylogenetic patterns |
| Vincent Moulton - Linnaeus Centre for Bioinformatics, University of Uppsala, Sweden | |
| Abstract | |
17h-17h30 | Coffee break |
17h30-18h30 | Bayesian gene/species tree reconciliation and orthology analysis using MCMC |
| Jens Lagergren - Stockholm Bioinformatics Center, University of Stockholm, Sweden |
10h-11h | Algorithms for phylogenetic footprinting |
| Mathieu Blanchette - University of Washington, Seattle, USA | |
| Slides (in power-point) | |
11h30-12h | Coffee break |
11h30-12h30 | Reverse engineering of gene regulatory networks |
| Irit Gat-Viks - University of Tel-Aviv, Israel | |
| Abstract | |
12h30-14h | Lunch |
14h-15h | Sorting by reversals: an explicitly graphic presentation |
| Anne Bergeron - University of Quebec at Montreal | |
| Abstract | |
15h-15h30 | Coffee break |
15h30-16h30 | On maximal instances for the syntenic distance |
| Guillaume Fertin - University of Nantes | |
| Abstract | |
| Slides (in postscript) |
