bpp::TreeLikelihoodInterface::ConstBranchModelDescription Class Reference

A pair of SubstitutionModel / SiteIterator. More...

#include <Bpp/Phyl/Legacy/Likelihood/TreeLikelihood.h>

Inheritance diagram for bpp::TreeLikelihoodInterface::ConstBranchModelDescription:

Public Member Functions
virtual	~ConstBranchModelDescription ()
virtual const TransitionModelInterface &	model () const =0
virtual std::shared_ptr< const TransitionModelInterface >	getModel () const =0
virtual const SubstitutionModelInterface &	substitutionModel () const =0
virtual std::shared_ptr< const SubstitutionModelInterface >	getSubstitutionModel () const =0
virtual SiteIterator *	getNewSiteIterator () const =0

Detailed Description

A pair of SubstitutionModel / SiteIterator.

Definition at line 75 of file TreeLikelihood.h.

Constructor & Destructor Documentation

~ConstBranchModelDescription()

virtual bpp::TreeLikelihoodInterface::ConstBranchModelDescription::~ConstBranchModelDescription ( )

inlinevirtual

Definition at line 78 of file TreeLikelihood.h.

Member Function Documentation

getModel()

virtual std::shared_ptr<const TransitionModelInterface> bpp::TreeLikelihoodInterface::ConstBranchModelDescription::getModel ( ) const

pure virtual

Implemented in bpp::AbstractTreeLikelihood::ConstNoPartitionBranchModelDescription.

getNewSiteIterator()

virtual SiteIterator* bpp::TreeLikelihoodInterface::ConstBranchModelDescription::getNewSiteIterator ( ) const

pure virtual

Implemented in bpp::AbstractTreeLikelihood::ConstNoPartitionBranchModelDescription.

getSubstitutionModel()

virtual std::shared_ptr<const SubstitutionModelInterface> bpp::TreeLikelihoodInterface::ConstBranchModelDescription::getSubstitutionModel ( ) const

pure virtual

Implemented in bpp::AbstractTreeLikelihood::ConstNoPartitionBranchModelDescription.

model()

virtual const TransitionModelInterface& bpp::TreeLikelihoodInterface::ConstBranchModelDescription::model ( ) const

pure virtual

Implemented in bpp::AbstractTreeLikelihood::ConstNoPartitionBranchModelDescription.

substitutionModel()

virtual const SubstitutionModelInterface& bpp::TreeLikelihoodInterface::ConstBranchModelDescription::substitutionModel ( ) const

pure virtual

Implemented in bpp::AbstractTreeLikelihood::ConstNoPartitionBranchModelDescription.

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The documentation for this class was generated from the following file:

• Bpp/Phyl/Legacy/Likelihood/TreeLikelihood.h