bpp::GeneMapperCsvExport::Record Class Reference

Store one line of the GeneMapper file. More...

#include <Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.h>

Collaboration diagram for bpp::GeneMapperCsvExport::Record:

Public Member Functions
	Record (const std::string &row)
	Constructor. More...
const std::string &	getSampleFileName () const
const std::string &	getSampleName () const
const std::string &	getPanel () const
const std::string &	getMarkerName () const
const std::string &	getDye () const
const size_t	getNumberOfAllele () const
const GeneMapperCsvExport::Allele &	getAllele (size_t allelePos) const

Private Attributes
std::string	sampleFile_
std::string	sampleName_
std::string	panel_
std::string	markerName_
std::string	dye_
std::vector< GeneMapperCsvExport::Allele >	alleles_
std::string	dac_
double	an_

Detailed Description

Store one line of the GeneMapper file.

Definition at line 126 of file GeneMapperCsvExport.h.

Constructor & Destructor Documentation

Record()

GeneMapperCsvExport::Record::Record

(

const std::string &

row

)

Constructor.

Parameters

row	One row of the file as a std::string

Definition at line 165 of file GeneMapperCsvExport.cpp.

References alleles_, an_, dac_, dye_, bpp::StringTokenizer::getToken(), markerName_, bpp::StringTokenizer::numberOfRemainingTokens(), panel_, sampleFile_, sampleName_, and bpp::TextTools::toDouble().

Member Function Documentation

getAllele()

const GeneMapperCsvExport::Allele& bpp::GeneMapperCsvExport::Record::getAllele ( size_t  allelePos ) const

inline

Definition at line 170 of file GeneMapperCsvExport.h.

References alleles_.

getDye()

const std::string& bpp::GeneMapperCsvExport::Record::getDye ( ) const

inline

Definition at line 162 of file GeneMapperCsvExport.h.

References dye_.

getMarkerName()

const std::string& bpp::GeneMapperCsvExport::Record::getMarkerName ( ) const

inline

Definition at line 158 of file GeneMapperCsvExport.h.

References markerName_.

getNumberOfAllele()

const size_t bpp::GeneMapperCsvExport::Record::getNumberOfAllele ( ) const

inline

Definition at line 166 of file GeneMapperCsvExport.h.

References alleles_.

getPanel()

const std::string& bpp::GeneMapperCsvExport::Record::getPanel ( ) const

inline

Definition at line 154 of file GeneMapperCsvExport.h.

References panel_.

getSampleFileName()

const std::string& bpp::GeneMapperCsvExport::Record::getSampleFileName ( ) const

inline

Definition at line 146 of file GeneMapperCsvExport.h.

References sampleFile_.

getSampleName()

const std::string& bpp::GeneMapperCsvExport::Record::getSampleName ( ) const

inline

Definition at line 150 of file GeneMapperCsvExport.h.

References sampleName_.

Member Data Documentation

alleles_

std::vector< GeneMapperCsvExport::Allele > bpp::GeneMapperCsvExport::Record::alleles_

private

Definition at line 134 of file GeneMapperCsvExport.h.

Referenced by getAllele(), getNumberOfAllele(), and Record().

an_

double bpp::GeneMapperCsvExport::Record::an_

private

Definition at line 136 of file GeneMapperCsvExport.h.

Referenced by Record().

dac_

std::string bpp::GeneMapperCsvExport::Record::dac_

private

Definition at line 135 of file GeneMapperCsvExport.h.

Referenced by Record().

dye_

std::string bpp::GeneMapperCsvExport::Record::dye_

private

Definition at line 133 of file GeneMapperCsvExport.h.

Referenced by getDye(), and Record().

markerName_

std::string bpp::GeneMapperCsvExport::Record::markerName_

private

Definition at line 132 of file GeneMapperCsvExport.h.

Referenced by getMarkerName(), and Record().

panel_

std::string bpp::GeneMapperCsvExport::Record::panel_

private

Definition at line 131 of file GeneMapperCsvExport.h.

Referenced by getPanel(), and Record().

sampleFile_

std::string bpp::GeneMapperCsvExport::Record::sampleFile_

private

Definition at line 129 of file GeneMapperCsvExport.h.

Referenced by getSampleFileName(), and Record().

sampleName_

std::string bpp::GeneMapperCsvExport::Record::sampleName_

private

Definition at line 130 of file GeneMapperCsvExport.h.

Referenced by getSampleName(), and Record().

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The documentation for this class was generated from the following files:

• Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.h
• Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp