bpp::SequenceWithQualityIterator Class Reference

Generic sequence iterator interface, allowing to loop over sequences with quality scores. More...

#include <Bpp/Seq/SequenceIterator.h>

Inheritance diagram for bpp::SequenceWithQualityIterator:

Collaboration diagram for bpp::SequenceWithQualityIterator:

Public Member Functions
	SequenceWithQualityIterator ()
virtual	~SequenceWithQualityIterator ()
virtual SequenceWithQuality *	nextSequence ()=0
virtual bool	hasMoreSequences () const =0

Detailed Description

Generic sequence iterator interface, allowing to loop over sequences with quality scores.

Definition at line 81 of file SequenceIterator.h.

Constructor & Destructor Documentation

SequenceWithQualityIterator()

bpp::SequenceWithQualityIterator::SequenceWithQualityIterator ( )

inline

Definition at line 85 of file SequenceIterator.h.

~SequenceWithQualityIterator()

virtual bpp::SequenceWithQualityIterator::~SequenceWithQualityIterator ( )

inlinevirtual

Definition at line 86 of file SequenceIterator.h.

Member Function Documentation

hasMoreSequences()

virtual bool bpp::SequenceIterator::hasMoreSequences ( ) const

pure virtualinherited

Implemented in bpp::StreamSequenceWithQualityIterator, and bpp::StreamSequenceIterator.

nextSequence()

virtual SequenceWithQuality* bpp::SequenceWithQualityIterator::nextSequence ( )

pure virtual

Implements bpp::SequenceIterator.

Implemented in bpp::StreamSequenceWithQualityIterator.

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The documentation for this class was generated from the following file:

• Bpp/Seq/SequenceIterator.h