Model.h File Reference

#include <Bpp/Exceptions.h>
#include <Bpp/Numeric/AbstractParametrizable.h>
#include <Bpp/Phyl/Likelihood/DataFlow/DataFlowCWiseComputing.h>
#include <Bpp/Phyl/Model/SubstitutionModel.h>
#include <functional>
#include <unordered_map>
#include "Definitions.h"

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Classes
class	bpp::ConfiguredModel
	Likelihood transition model. More...
class	bpp::EquilibriumFrequenciesFromModel
class	bpp::TransitionMatrixFromModel
class	bpp::TransitionFunctionFromModel
class	bpp::ProbabilitiesFromMixedModel
class	bpp::ProbabilityFromMixedModel

Namespaces
	bpp
	Defines the basic types of data flow nodes.

Functions
MatrixDimension	bpp::transitionMatrixDimension (std::size_t nbState)
RowVectorDimension	bpp::equilibriumFrequenciesDimension (std::size_t nbState)