ProcessTree.h File Reference

#include <Bpp/Graph/AssociationTreeGraphImplObserver.h>
#include <Bpp/Numeric/ParametrizableCollection.h>
#include <Bpp/Phyl/Likelihood/DataFlow/Parametrizable.h>
#include <Bpp/Phyl/Likelihood/ParametrizablePhyloTree.h>
#include <Bpp/Phyl/Likelihood/ProcessComputationTree.h>
#include <Bpp/Phyl/Likelihood/SubstitutionProcess.h>
#include "Definitions.h"
#include "Model.h"
#include "Parameter.h"
#include <string>

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Classes
class	bpp::ProcessEdge
class	bpp::ProcessTree

Namespaces
namespace	bpp
	Defines the basic types of data flow nodes.

Typedefs
typedef ProcessComputationNode	bpp::ProcessNode
using	bpp::ProcessEdgePtr = std::shared_ptr< ProcessEdge >
using	bpp::ProcessNodePtr = std::shared_ptr< ProcessNode >

Functions
ParametrizableCollection< ConfiguredModel >	bpp::makeConfiguredModelCollection (Context &context, const SubstitutionProcessInterface &process, ParameterList &parList)
	Make a Collection of ConfiguredModel, from the models described in the SubstitutionProcess, and sharing ConfiguredParameters from a ParameterList. More...