#include <Bpp/Exceptions.h>
#include <Bpp/Numeric/ParametrizableCollection.h>
#include <Bpp/Numeric/Prob/DiscreteDistribution.h>
#include <Bpp/Numeric/Random/RandomTools.h>
#include <Bpp/Numeric/VectorTools.h>
#include <Bpp/Seq/Alphabet/Alphabet.h>
#include <Bpp/Seq/Alphabet/NucleicAlphabet.h>
#include "../Model/FrequencySet/FrequencySet.h"
#include "../Model/SubstitutionModel.h"
#include "ParametrizablePhyloTree.h"
#include "SubstitutionProcess.h"
#include "SubstitutionProcessCollectionMember.h"

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Classes
class	bpp::SubstitutionProcessCollection
	Collection of Substitution Process, which owns all the necessary objects: Substitution models, frequencies sets, rate distributions and trees. More...

Namespaces
	bpp
	Defines the basic types of data flow nodes.

Classes

Namespaces