General interface for tree readers. More...

#include <Bpp/Phyl/Io/IoTree.h>

Inheritance diagram for bpp::IPhyloTree:

Collaboration diagram for bpp::IPhyloTree:

Public Member Functions
	IPhyloTree ()

virtual	~IPhyloTree ()

virtual std::unique_ptr< PhyloTree >	readPhyloTree (const std::string &path) const =0
	Read a tree from a file. More...

virtual std::unique_ptr< PhyloTree >	readPhyloTree (std::istream &in) const =0
	Read a tree from a stream. More...

virtual const std::string	getDataType () const

virtual const std::string	getFormatName () const=0

virtual const std::string	getFormatDescription () const=0

Detailed Description

General interface for tree readers.

Definition at line 92 of file IoTree.h.

Constructor & Destructor Documentation

◆ IPhyloTree()

bpp::IPhyloTree::IPhyloTree ( )

inline

Definition at line 96 of file IoTree.h.

◆ ~IPhyloTree()

virtual bpp::IPhyloTree::~IPhyloTree ( )

inlinevirtual

Definition at line 97 of file IoTree.h.

Member Function Documentation

◆ getDataType()

virtual const std::string bpp::IOTree::getDataType ( ) const

inlinevirtualinherited

Implements bpp::IOFormat.

Definition at line 51 of file IoTree.h.

◆ readPhyloTree() [1/2]

virtual std::unique_ptr<PhyloTree> bpp::IPhyloTree::readPhyloTree ( const std::string & path ) const

pure virtual

Read a tree from a file.

Parameters

path	The file path.

Returns: A new tree object.

Exceptions

Exception If an error occurred.

Implemented in bpp::AbstractIPhyloTree.

◆ readPhyloTree() [2/2]

virtual std::unique_ptr<PhyloTree> bpp::IPhyloTree::readPhyloTree ( std::istream & in ) const