MonolocusGenotypeTools.cpp

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// SPDX-FileCopyrightText: The Bio++ Development Group
//
// SPDX-License-Identifier: CECILL-2.1
 
// From Pop
#include "MonoAlleleMonolocusGenotype.h"
#include "BiAlleleMonolocusGenotype.h"
#include "MultiAlleleMonolocusGenotype.h"
 
#include "MonolocusGenotypeTools.h"
 
using namespace bpp;
using namespace std;
 
std::unique_ptr<MonolocusGenotypeInterface> MonolocusGenotypeTools::buildMonolocusGenotypeByAlleleKey(const std::vector<size_t> alleleKeys)
{
  if (alleleKeys.size() < 1)
    throw Exception("MonolocusGenotypeTools::buildMonolocusGenotypeByAlleleKey: no key in allele_keys.");
 
  if (alleleKeys.size() == 1)
    return unique_ptr<MonolocusGenotypeInterface>(new MonoAlleleMonolocusGenotype(alleleKeys));
  if (alleleKeys.size() == 2)
    return unique_ptr<MonolocusGenotypeInterface>(new BiAlleleMonolocusGenotype(alleleKeys));
  // for all other cases (allele_keys.size() > 2)
  return unique_ptr<MonolocusGenotypeInterface>(new MultiAlleleMonolocusGenotype(alleleKeys));
}