BppOTransitionModelFormat.cpp File Reference

#include <Bpp/Io/BppODiscreteDistributionFormat.h>
#include <Bpp/Io/BppOParametrizableFormat.h>
#include <Bpp/Io/FileTools.h>
#include <Bpp/Io/OutputStream.h>
#include <Bpp/Seq/Alphabet/AlphabetTools.h>
#include <Bpp/Seq/App/SequenceApplicationTools.h>
#include <Bpp/Text/KeyvalTools.h>
#include <Bpp/Text/StringTokenizer.h>
#include <Bpp/Text/TextTools.h>
#include "../App/PhylogeneticsApplicationTools.h"
#include "../Model/Codon/DFP07.h"
#include "../Model/Codon/RELAX.h"
#include "../Model/Codon/YNGP_M1.h"
#include "../Model/Codon/YNGP_M10.h"
#include "../Model/Codon/YNGP_M2.h"
#include "../Model/Codon/YNGP_M3.h"
#include "../Model/Codon/YNGP_M7.h"
#include "../Model/Codon/YNGP_M8.h"
#include "../Model/Codon/YNGP_M9.h"
#include "../Model/MixedTransitionModel.h"
#include "../Model/MixtureOfATransitionModel.h"
#include "../Model/MixtureOfTransitionModels.h"
#include "../Model/OneChangeRegisterTransitionModel.h"
#include "../Model/OneChangeTransitionModel.h"
#include "../Model/Protein/LG10_EX_EHO.h"
#include "../Model/Protein/LGL08_CAT.h"
#include "../Model/Protein/LLG08_EHO.h"
#include "../Model/Protein/LLG08_EX2.h"
#include "../Model/Protein/LLG08_EX3.h"
#include "../Model/Protein/LLG08_UL2.h"
#include "../Model/Protein/LLG08_UL3.h"
#include "BppOFrequencySetFormat.h"
#include "BppORateDistributionFormat.h"
#include "BppOTransitionModelFormat.h"
#include <Bpp/Numeric/Prob/ConstantDistribution.h>
#include <Bpp/Numeric/AutoParameter.h>
#include <iomanip>
#include <set>

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