5 #ifndef BPP_PHYL_MODEL_CODON_YNGP_M1_H
6 #define BPP_PHYL_MODEL_CODON_YNGP_M1_H
45 std::shared_ptr<const GeneticCode> gc,
46 std::unique_ptr<CodonFrequencySetInterface> codonFreqs);
51 std::string
getName()
const override {
return "YNGP_M1"; }
The Yang et al (2000) M1 substitution model for codons, with the more realistic modification in Wong ...
YNGP_M1(std::shared_ptr< const GeneticCode > gc, std::unique_ptr< CodonFrequencySetInterface > codonFreqs)
std::string getName() const override
Get the name of the model.
YNGP_M1 * clone() const override
void updateMatrices_() override
Abstract generic class for The Yang et al (2000) M substitution models for codons....
Defines the basic types of data flow nodes.