YNGP_M3.h

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// SPDX-FileCopyrightText: The Bio++ Development Group
//
// SPDX-License-Identifier: CECILL-2.1
 
#ifndef BPP_PHYL_MODEL_CODON_YNGP_M3_H
#define BPP_PHYL_MODEL_CODON_YNGP_M3_H
 
#include <Bpp/Seq/GeneticCode/GeneticCode.h>
 
#include "YNGP_M.h"
 
namespace bpp
{
class YNGP_M3 :
  public YNGP_M
{
public:
  YNGP_M3(
      std::shared_ptr<const GeneticCode> gc,
      std::unique_ptr<CodonFrequencySetInterface> codonFreqs,
      unsigned int nclass = 3);
 
  YNGP_M3* clone() const override { return new YNGP_M3(*this); }
 
public:
  std::string getName() const override { return "YNGP_M3"; }
 
protected:
  void updateMatrices_() override;
};
} // end of namespace bpp.
#endif // BPP_PHYL_MODEL_CODON_YNGP_M3_H